The output function of the maplot module

This module produces an MA plot of log(10) expression vs log(2) fold change for contrasts defined in the `contrasts` slot of an 'ExploratorySummarizedExperimentList` object.

Usage

maplotOutput(id)

Arguments

id

Module namespace

Value

output An HTML tag object that can be rendered as HTML using as.character()

Details

Leverages the contrasts and scatterplot modules

Examples

maplotOutput("experiment")
#> Error in maplotOutput("experiment"): could not find function "maplotOutput"

# Almost certainly used via application creation

data(airway, package = "airway")
ese <- as(airway, "ExploratorySummarizedExperiment")
eselist <- ExploratorySummarizedExperimentList(ese)
#> Creating ExploratorySummarizedExperimentList object

if (interactive()) {
  app <- prepare_app("maplot", eselist)
  shiny::shinyApp(ui = app$ui, server = app$server)
}