The server function of the boxplot module

This module produces displays of the quartiles of the values in the selected assay matrix. For low sample numbers (<= 20) the default is a boxplot produced using ggplot2. For higher sample numbers, the default is a line-based alternative using plotly.

Usage

boxplot(id, eselist)

Arguments

id

Module namespace

eselist

ExploratorySummarizedExperimentList object containing ExploratorySummarizedExperiment objects

Details

This function is called directly, using the same id as its UI counterpart, and wraps its logic in moduleServer() (see example).

Examples

data(airway, package = "airway")
ese <- as(airway, "ExploratorySummarizedExperiment")
eselist <- ExploratorySummarizedExperimentList(ese)
#> Creating ExploratorySummarizedExperimentList object

# Almost certainly used via application creation

if (interactive()) {
  boxplot("boxplot", eselist)
  app <- prepare_app("boxplot", eselist)
  shiny::shinyApp(ui = app$ui, server = app$server)
}